Package: nparACT 0.8
nparACT: Non-Parametric Measures of Actigraphy Data
Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) <doi:10.1016/j.mex.2016.05.006> and van Someren et al. (1999) <doi:10.3109/07420529908998724>. Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.
Authors:
nparACT_0.8.tar.gz
nparACT_0.8.zip(r-4.5)nparACT_0.8.zip(r-4.4)nparACT_0.8.zip(r-4.3)
nparACT_0.8.tgz(r-4.4-any)nparACT_0.8.tgz(r-4.3-any)
nparACT_0.8.tar.gz(r-4.5-noble)nparACT_0.8.tar.gz(r-4.4-noble)
nparACT_0.8.tgz(r-4.4-emscripten)nparACT_0.8.tgz(r-4.3-emscripten)
nparACT.pdf |nparACT.html✨
nparACT/json (API)
| # Install 'nparACT' in R: |
| install.packages('nparACT', repos = c('https://christineblume.r-universe.dev', 'https://cloud.r-project.org')) |
- sleepstudy - Actigraphy Data from a Sleep Study
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 years agofrom:aaa2590495. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 20 2024 |
| R-4.5-win | OK | Aug 20 2024 |
| R-4.5-linux | OK | Aug 20 2024 |
| R-4.4-win | OK | Aug 20 2024 |
| R-4.4-mac | OK | Aug 20 2024 |
| R-4.3-win | OK | Aug 20 2024 |
| R-4.3-mac | OK | Aug 20 2024 |
Exports:nparACT_auxfunctions1nparACT_auxfunctions2nparACT_basenparACT_base_loopnparACT_flexnparACT_flex_loopnparACT_ISIVfunctionsnparACT_RAfunctions
Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalesstringistringrtibbleutf8vctrsviridisLitewithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Non-Parametric Measures of Actigraphy Data | nparACT-package nparACT |
| List of Auxiliary Functions | nparACT_auxfunctions1 |
| List of Auxiliary Functions | nparACT_auxfunctions2 |
| Classic Nonparametric Actigraphy Measures for Single Actigraphy Files | nparACT_base |
| Classic Nonparametric Actigraphy Measures for Multiple Actigraphy Files | nparACT_base_loop |
| Extended Nonparametric Actigraphy Measures for Single Actigraphy Files | nparACT_flex |
| Extended Nonparametric Actigraphy Measures for Multiple Actigraphy Files | nparACT_flex_loop |
| List of Functions Computing IS and IV Values | nparACT_ISIVfunctions |
| List of Functions Computing RA, L and M Values and the Respective Start Times | nparACT_RAfunctions |
| Actigraphy Data from a Sleep Study | sleepstudy |
