Package: nparACT 0.9.1
nparACT: Non-Parametric Measures of Actigraphy Data
Computes interdaily stability (IS), intradaily variability (IV) & the relative amplitude (RA) from actigraphy data as described in Blume et al. (2016) <doi:10.1016/j.mex.2016.05.006> and van Someren et al. (1999) <doi:10.3109/07420529908998724>. Additionally, it also computes L5 (i.e. the 5 hours with lowest average actigraphy amplitude) and M10 (the 10 hours with highest average amplitude) as well as the respective start times. The flex versions will also compute the L-value for a user-defined number of minutes. IS describes the strength of coupling of a rhythm to supposedly stable zeitgebers. It varies between 0 (Gaussian Noise) and 1 for perfect IS. IV describes the fragmentation of a rhythm, i.e. the frequency and extent of transitions between rest and activity. It is near 0 for a perfect sine wave, about 2 for Gaussian noise and may be even higher when a definite ultradian period of about 2 hrs is present. RA is the relative amplitude of a rhythm. Note that to obtain reliable results, actigraphy data should cover a reasonable number of days.
Authors:
nparACT_0.9.1.tar.gz
nparACT_0.9.1.zip(r-4.7)nparACT_0.9.1.zip(r-4.6)nparACT_0.9.1.zip(r-4.5)
nparACT_0.9.1.tgz(r-4.6-any)nparACT_0.9.1.tgz(r-4.5-any)
nparACT_0.9.1.tar.gz(r-4.7-any)nparACT_0.9.1.tar.gz(r-4.6-any)
nparACT_0.9.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
nparACT/json (API)
| # Install 'nparACT' in R: |
| install.packages('nparACT', repos = c('https://christineblume.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/christineblume/nparact/issues
- sleepstudy - Actigraphy results from a participant.
Last updated from:1ceacb3a38. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 143 | ||
| source / vignettes | OK | 194 | ||
| linux-release-x86_64 | OK | 142 | ||
| macos-release-arm64 | OK | 97 | ||
| macos-oldrel-arm64 | OK | 93 | ||
| windows-devel | OK | 79 | ||
| windows-release | OK | 89 | ||
| windows-oldrel | OK | 90 | ||
| wasm-release | OK | 106 |
Exports:nparACT_basenparACT_base_loopnparACT_flexnparACT_flex_loop
Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrR6RColorBrewerrlangS7scalesstringistringrvctrsviridisLitewithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| nparACT: Non-parametric analysis of actigraphy data | nparACT-package nparACT |
| Compute classic non-parametric actigraphy measures | nparACT_base |
| Compute classic non-parametric actigraphy measures for multiple files | nparACT_base_loop |
| Compute non-parametric actigraphy measures with a flexible low-activity window | nparACT_flex |
| Compute non-parametric actigraphy measures with a flexible low-activity window for multiple files | nparACT_flex_loop |
| Actigraphy results from a participant. | sleepstudy |
